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1. Jones, A. G. and J. C. Avise. 1997. Microsatellite analysis of maternity and the mating system in the Gulf pipefish (Syngnathus scovelli), a species with male pregnancy and sex-role reversal. Molecular Ecology 6:203-213. 2. Jones, A. G. and J. C. Avise. 1997. Polygynandry in the dusky pipefish Syngnathus floridae revealed by microsatellite DNA markers. Evolution 51:1611-1622. 3. Jones, A. G., S. Östlund-Nilsson and J. C. Avise. 1998. A microsatellite assessment of sneaked fertilizations and egg thievery in the fifteenspine stickleback. Evolution 52:848-858. 4. Jones, A. G., C. A. Stockwell, D. Walker and J. C. Avise. 1998. The molecular basis of a microsatellite null allele from the White Sands pupfish. Journal of Heredity 89:339-342. 5. Stockwell, C. A., M. Mulvey, and A. G. Jones. 1998. Genetic evidence for the recognition of two ESUs of the White Sands pupfish. Animal Conservation 1:213-225. 6. Jones, A. G., C. Kvarnemo, G. I. Moore, L. W. Simmons, and J. C. Avise. 1998. Microsatellite evidence for monogamy and sex-biased recombination in the Western Australian seahorse, Hippocampus angustus. Molecular Ecology 7:1497-1505. 7. Zane, L., W. S. Nelson, A. G. Jones and J. C. Avise. 1999. Microsatellite assessment of multiple paternity in natural populations of a live-bearing fish, Gambusia holbrooki. Journal of Evolutionary Biology 12:61-69. 8. Jones, A. G., G. Rosenqvist, A. Berglund, and J. C. Avise. 1999. Clustered microsatellite mutations in the pipefish Syngnathus typhle. Genetics 152:1057-1063. 9. Jones, A. G., G. Rosenqvist, A. Berglund, and J. C. Avise. 1999. The genetic mating system of a sex-role-reversed pipefish (Syngnathus typhle): a molecular inquiry. Behavioral Ecology and Sociobiology 46:357-365. 10. Jones, A. G., G. Rosenqvist, A. Berglund, S. J. Arnold, and J. C. Avise. 2000. The Bateman gradient and the cause of sexual selection in a sex-role-reversed pipefish. Proceedings of the Royal Society of
11. Jones, A. G., G. Rosenqvist, A. Berglund, and J. C. Avise. 2000. Mate quality influences multiple maternity in the sex-role-reversed pipefish Syngnathus typhle. Oikos 90:321-326. 12. Kvarnemo, C., G. I. Moore, A. G. Jones, W. S. Nelson, and J. C. Avise. 2000. Monogamous pair bonds and mate switching in the Western Australian seahorse Hippocampus subelongatus. Journal of Evolutionary Biology 13:882-888.
13. Jones, A. G. and J. C. Avise. 2001. Mating systems and sexual selection in male-pregnant pipefishes and seahorses: insights from microsatellite-based studies of maternity. Journal of Heredity 92: 150-158.
14. Jones, A. G., D. Walker, K. Lindström, C. Kvarnemo, and J. C. Avise. 2001. Surprising similarity of sneaking rates and genetic mating patterns in two populations of the sand goby experiencing disparate sexual selection regimes. Molecular Ecology 10:461-469. 15. Jones, A. G. 2001. GERUD1.0: A computer program for the reconstruction of parental genotypes from progeny arrays using multi-locus DNA data. Molecular Ecology Notes 1:215-218.
16. McCoy, E. E., A. G. Jones, and J. C. Avise. 2001. The genetic mating system and tests for cuckoldry in a pipefish species in which males fertilize eggs and brood offspring externally. Molecular Ecology 10:1793-1800.
17a. Arnold, S. J., M. E. Pfrender, and A. G. Jones. 2001. The adaptive landscape as a conceptual bridge between micro- and macro-evolution. Genetica 112/113:9-32. 17b. Arnold, S. J., M. E. Pfrender, and A. G. Jones. 2001. The adaptive landscape as a conceptual bridge between micro- and macro-evolution. Pp. 9-32 in Microevolution -- Rate, Pattern, Process (A.P. Hendry, M.T. Kinnison, Eds.) Kluwer Academic Publishers. (reprinting of publication 17a) 18. Jones, A. G., M. S. Blouin, and S. J. Arnold. 2001. Genetic variation in two populations of the rough-skinned newt (Taricha granulosa) assessed using novel tetranucleotide microsatellite loci. Molecular Ecology Notes 1:293-296. 19. Jones, A. G., D. Walker, C. Kvarnemo, K. Lindström, and J. C. Avise. 2001. How cuckoldry can decrease the opportunity for sexual selection: data and theory from a genetic parentage analysis of the sand goby, Pomatoschistus minutus. Proceedings of the National Academy of Sciences USA 98:9151-9156. 20. Jones, A. G., D. Walker, and J. C. Avise. 2001. Genetic evidence for extreme polyandry and extraordinary sex-role reversal in a pipefish. Proceedings of the Royal Society of
21. Jones, A. G., E. M. Adams, and S. J. Arnold. 2002. Topping off: a mechanism of first-male sperm precedence in a vertebrate. Proceedings of the National Academy of Sciences USA 99:2078-2081. 22. Jones, A. G. 2002. The evolution of alternative cryptic female choice strategies in age-structured populations. Evolution 56: 2530-2536. 23. Jones, A. G., J. R. Arguello, and S. J. Arnold. 2002. Validation of Bateman’s principles: a genetic study of mating patterns and sexual selection in newts. Proceedings of the Royal Society of
24. Avise, J. C., A. G. Jones, D. Walker, J. A. DeWoody, and collaborators. 2002. Genetic mating systems and reproductive natural histories of fishes: Lessons for ecology and evolution. Annual Review of Genetics 36:19-45. 25. Jones, A. G., G. I. Moore, C. Kvarnemo, D. Walker, and J. C. Avise. 2003. Sympatric speciation as a consequence of male pregnancy in seahorses. Proceedings of the National
26. Jones, A. G., S. J. Arnold, and R. Bürger. 2003. Stability of the G-matrix in a population experiencing stabilizing selection, pleiotropic mutation, and genetic drift. Evolution 57:1747-1760. 27. Jones, A. G. and W. R. Ardren. 2003. Methods of parentage analysis in natural populations. Molecular Ecology 12:2511-2523. 28. Pampoulie, C., E. Gysels, B. Hellemans, G. E. Maes, V. Leentjes, A. G. Jones, and F. A. M. Volckaert. 2004. Evidence for fine scale genetic structure and estuarine colonisation in a high gene flow marine goby (Pomatoschistus minutus). Heredity 92:434-445. 29. Watts, R. A., C. A. Palmer, R. C. Feldhoff, P. W. Feldhoff, L. D. Houck, A. G. Jones, M. E. Pfrender, S. M. Rollman, and S. J. Arnold. 2004. Discordant modes of evolution at different levels in a pheromone signaling system. Molecular Biology and Evolution 21:1032-1041. 30. Hoffman, E. A., J. R. Arguello, N. Kolm, A. Berglund, and A. G. Jones. 2004. Eleven polymorphic microsatellite loci in a coral reef fish, Pterapogon kauderni. Molecular Ecology Notes 4:342-344. 31. Jones, A. G., S. J. Arnold, and R. Bürger. 2004. Evolution and stability of the G-matrix under a moving optimum. Evolution 58:1639-1654 32. Jones, A. G., J. R. Arguello, and S. J. Arnold. 2004. Molecular parentage analysis in experimental newt populations: the response of mating system measures to variation in the operational sex ratio. The American Naturalist 164:444-456. 33. Jones, A. G. 2004. Male pregnancy and the formation of seahorse species. The Biologist 51:216-221. 34. Hoffman, E. A., N. Kolm, A. Berglund, J. R. Arguello, and A. G. Jones. 2005. Genetic structure in the coral-reef associated Bangaii cardinalfish, Pterapogon kauderni. Molecular Ecology 14:1367-1375. 35. Kolm, N., E. A. Hoffman, J. Olsson, A. Berglund, and A. G. Jones. 2005. Group stability and homing behaviour but no kin group structures in a coral reef fish. Behavioral Ecology 16:521-527. 36. Adams, E. A., A. G. Jones, and S. J. Arnold. 2005. Multiple paternity in a natural population of a salamander with long-term sperm storage. Molecular Ecology 14:1803-1810. 37. Jones, A. G. 2005. GERUD2.0: A computer program for the reconstruction of parental genotypes from progeny arrays with known or unknown parents. Molecular Ecology Notes 5:708-711. 38. Jones, A. G., G. Rosenqvist, A. Berglund, and J. C. Avise. 2005. The measurement of sexual selection using Bateman’s principles: an experimental test in the sex-role-reversed pipefish Syngnathus typhle. Integrative and Comparative Biology 45:874-884. 39. Hoffman, E. A., K. B. Mobley, and A. G. Jones. 2006. Male pregnancy and the evolution of body segmentation in seahorses and pipefishes. Evolution 60:404-410. 40. Hoffman, E. A., F. W. Schueler, A. G. Jones, and M. S. Blouin. 2006. An analysis of selection on a color polymorphism in the northern leopard frog (Rana pipiens). Molecular Ecology 15:2627-2641. 41. Harlin-Cognato, A., E. A. Hoffman, and A. G. Jones. 2006. Gene co-option without duplication during the evolution of a male pregnancy gene in pipefish. Proceedings of the National Academy of Sciences, 103:19407-19412. 42. Kvarnemo, C., G. I. Moore, and A. G. Jones. 2007. Sexually selected females in the monogamous Western Australian seahorse, Hippocampus subelongatus. Proceedings of the Royal Society of London B, 274:521-525. 43. Mobley KB, and AG Jones. 2007. Geographical variation in the mating system of the dusky pipefish (Syngnathus floridae). Molecular Ecology. 16:2596-2606. 44. Jones, AG, SJ Arnold, R Burger. 2007. The mutation matrix and the evolution of evolvability. Evolution. 61:727-745. 45. Jones, AG. 2008. A theoretical quantitative genetic study of negative species interactions and extinction times in changing environments. BMC Evolutionary Biology 8:119. 46. Arnold, S. J., R. Bürger, P. A. Hohenlohe, B. C. Ajie, and A. G. Jones. 2008. Understanding the evolution and stability of the G-matrix. Evolution 62:2451-2461. 47. Partridge, C., I. Ahnesjö, C. Kvarnemo, K. Mobley, A. Berglund, and A. G. Jones. 2009. The effect of perceived female parasite load on post-copulatory male choice in a sex-role-reversed pipefish. Behavioral Ecology and Sociobiology 63:345-354. 48. Coleman, S. W., A. Harlin-Cognato, and A. G. Jones. 2009. Reproductive isolation, reproductive mode, and sexual selection: tests of the viviparity-driven conflict hypothesis. The American Naturalist 173:291-303. 49. Mobley, K. B., T. Amundsen, E. Forsgren, P. A. Svensson, and A. G. Jones. 2009. Multiple mating and a low incidence of cuckoldry for nest-holding males in the two-spotted goby, Gobiusculus flavescens. BMC Evolutionary Biology 9:6. 50. Ratterman, N. L., G. G. Rosenthal, and A. G. Jones. 2009. Sex recognition via chemical cues in the sex-role-reversed Gulf pipefish (Syngnathus scovelli). Ethology, 115(4): 339-46. 51. Mobley, K. B. and A. G. Jones. 2009. Environmental, demographic, and genetic mating system variation among five geographically distinct dusky pipefish (Syngnathus floridae) populations. Molecular Ecology, 18(7): 1476-90. 52. Jones, A. G. 2009. On the opportunity for sexual selection, the Bateman gradient and the maximum intensity of sexual selection. Evolution, 63(7): 1673-84. Examine the empirical example using these data sets: Female Newt Sample Data and Male Newt Sample Data
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53. Jones, A. G. and J. C. Avise. 2003. Quick guide: Male pregnancy. Current Biology 13:R791-R791. 54. Jones, A. G. 2004. Sea turtles: Old Viruses and New Tricks. Current Biology 14(19):R842-R843 |
Jones Lab, Department of Biology, 3258 TAMU, Texas A&M University, College Station, TX 77843 Phone: (979) 845-4342
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