Recent Publications in TAMU Biology

Profile Photo of Wayne Versaw

Sahu, A, Banerjee, S, Raju, AS, Chiou, TJ, Garcia, LR, Versaw, WK et al.. Spatial profiles of phosphate in roots indicate developmental control of uptake, recycling, and sequestration. Plant Physiol. 2020; :. doi: 10.1104/pp.20.01008.

Profile Photo of Heath Blackmon

Zachary B. Hancock and Heath Blackmon. Ghosts of a structured past: Impacts of ancestral patterns of isolation-by-distance on divergence-time estimation. Journal of Heredity. https://doi.org/10.1093/jhered/esaa042

Profile Photo of Heath Blackmon

Sylvester T., Hjelmen C.E., Hanrahan S.J., Lenhart P.A., Johnston J.S. and Blackmon H. 2020 Lineage-specific patterns of chromosome evolution are the rule not the exception in Polyneoptera insects. Proc. R. Soc. B 287:20201388 http://doi.org/10.1098/rspb.2020.1388

joe bernardo

Yan Liang, Olle Hints, Peng Tang, Chenyang Cai, Daniel Goldman, Jaak Nõlvak, Erik Tihelka, Ke Pang, Joseph Bernardo, Wenhui Wang; Fossilized reproductive modes reveal a protistan affinity of Chitinozoa. Geology doi: https://doi.org/10.1130/G47865.1

Profile Photo of Mary Wicksten

Salinas-de-León, P., Martí-Puig, P., Buglass, S. et al. Characterization of deep-sea benthic invertebrate megafauna of the Galapagos Islands. Sci Rep 10, 13894 (2020). https://doi.org/10.1038/s41598-020-70744-1

Profile Photo of Mary Wicksten

Arnés-Urgellés C, Buglass S, Ahyong ST, Salinas-de-León P, Wicksten MK, Marsh L (2020) Arthropoda; Crustacea; Decapoda of deep-sea volcanic habitats of the Galapagos Marine Reserve, Tropical Eastern Pacific. Biodiversity Data Journal 8: e54482. https://doi.org/10.3897/BDJ.8.e54482

Profile Photo of Heath Blackmon

Jonika, M., Lo, J. and Blackmon, H., 2020. Mode and Tempo of Microsatellite Evolution across 300 Million Years of Insect Evolution. Genes11(8), p.945. https://doi.org/10.3390/genes11080945

Profile Photo of Heath Blackmon

Ruckman, S.N. and Blackmon, H. The March of the Beetles: epistatic components dominate divergence in dispersal tendency in Tribolium castaneum. Journal of Heredity. https://doi.org/10.1093/jhered/esaa030

profile photo of steve lockless

Hudson MA, Siegele DA, Lockless SW. Use of a Fluorescence-Based Assay To Measure Escherichia coli Membrane Potential Changes in High Throughput. Antimicrob Agents Chemother. 2020;64(9):e00910-20. Published 2020 Aug 20. doi:10.1128/AAC.00910-20

Profile Photo of Heath Blackmon

Hjelmen, C.E., Holmes, V.R., Burrus, C.G., Piron, E., Mynes, M., Garrett, M.A., Blackmon, H. and Johnston, J.S., 2020. Thoracic underreplication in Drosophila species estimates a minimum genome size and the dynamics of added DNA. Evolution. 74:7 1423-1426. https://doi.org/10.1111/evo.14022

Profile Photo of Angela Mitchell

Enterobacterial Common Antigen: Synthesis and Function of an Enigmatic Molecule
Ashutosh K. RaiAngela M. Mitchell.

Profile Photo of Christine Merlin

Merlin, Christine, Samantha E. Iiams, and Aldrin B. Lugena. “Monarch Butterfly Migration Moving into the Genetic Era.” Trends in Genetics (2020). DOI: https://doi.org/10.1016/j.tig.2020.06.011

Profile Photo of Beiyan Nan

Establishing rod shape from spherical, peptidoglycan-deficient bacterial spores. Huan Zhang, Garrett A. Mulholland, Sofiene Seef, Shiwei Zhu, Jun Liu, Tâm Mignot, Beiyan Nan. Proceedings of the National Academy of Sciences Jun 2020, 117 (25) 14444-14452; DOI: 10.1073/pnas.2001384117

profile photo of steve lockless

Zhang H, Pan Y, Hu L, et al. TrkA undergoes a tetramer-to-dimer conversion to open TrkH which enables changes in membrane potential. Nat Commun. 2020;11(1):547. Published 2020 Jan 28. doi:10.1038/s41467-019-14240-9

profile photo of rene garcia

Succinate Dehydrogenase-Regulated Phosphoenolpyruvate Carboxykinase Sustains Copulation Fitness in Aging C. elegans Males. Goncalves J, Wan Y, Guo X, Rha K, LeBoeuf B, Zhang L, Estler K, Garcia LR. iScience. 2020 Mar 19;23(4):100990. doi: 10.1016/j.isci.2020.100990.

profile photo of rene garcia

WNT regulates programmed muscle remodeling through PLC-β and calcineurin in C. elegans males. LeBoeuf B, Chen X, Garcia LR. Development. 2020 Apr 21. pii: dev.181305. doi: 10.1242/dev.181305. PMID: 32317273

Profile Photo of Deb Bell Pedersen

Circadian clock control of eIF2α phosphorylation is necessary for rhythmic translation initiation. Shanta KarkiKathrina CastilloZhaolan DingOlivia KerrTeresa M. LambCheng WuMatthew S. SachsDeborah Bell-Pedersen.

Profile Photo of Mike Manson

Biphasic chemotaxis of Escherichia coli to the microbiota metabolite indole. Yang J, Chawla R, Rhee KY, Gupta R, Manson MD, Jayaraman A, Lele PP. Proc Natl Acad Sci U S A. 2020 Mar 2. pii: 201916974. doi: 10.1073/pnas.1916974117. [Epub ahead of print]

Profile Photo of Mike Manson

pH Sensing in Bacillus subtilis: a New Path to a Common Goal. Manson MD. J Bacteriol. 2020 Jan 29;202(4). pii: e00701-19. doi: 10.1128/JB.00701-19. Print 2020 Jan 29

Profile Photo of Mike Manson

Molecular Mechanism for Attractant Signaling to DHMA by E. coli Tsr. Orr AA, Yang J, Sule N, Chawla R, Hull KG, Zhu M, Romo D, Lele PP, Jayaraman A, Manson MD, Tamamis P. Biophys J. 2020 Jan 21;118(2):492-504. doi: 10.1016/j.bpj.2019.11.3382. Epub 2019 Nov 27

Profile Photo of Charles Criscione

Clonemate cotransmission supports a role for kin selection in a puppeteer parasite. Charles D. Criscione, Bradley J. van Paridon, John S. Gilleard, Cameron P. Goater. Proceedings of the National Academy of Sciences Mar 2020, 201922272; DOI: 10.1073/pnas.1922272117

Profile Photo of Gil Rosenthal

Angela M. Achorn, Gil G. Rosenthal. It’s Not about Him: Mismeasuring ‘Good Genes’ in Sexual Selection. Trends in Ecology & Evolution, Volume 35, Issue 3, 2020, Pages 206-219, ISSN 0169-5347, https://doi.org/10.1016/j.tree.2019.11.007

Profile Photo of Mary Wicksten

Wicksten, M.K. One to a customer: associations between squat lobsters (Chirostyloidea) and their anthozoan hosts. Mar. Biodivers. 50, 14 (2020). https://doi.org/10.1007/s12526-019-01035-w

Profile Photo of Larry Griffing

Griffing, L.R. (2019), The Lost Portrait of Robert Hooke?. Journal of Microscopy. Accepted Author Manuscript. doi:10.1111/jmi.12828

Profile Photo of Larry Griffing

Lawrence Griffing and Krishna Kumar (September 11th 2019). Hydroponic Systems for Arabidopsis Extended to Crop Plants [Online First], IntechOpen, DOI: 10.5772/intechopen.89110.

Profile Photo of Christine Merlin

Photoperiodic and clock regulation of the vitamin A pathway in the brain mediates seasonal responsiveness in the monarch butterfly. Iiams SE, Lugena AB, Zhang Y, Hayden AN, Merlin C. Proc Natl Acad Sci U S A. 2019 Nov 25. pii: 201913915. doi: 10.1073/pnas.1913915116.

Profile Photo of Tom McKnight

Acylsugar and plant defense gene networks. Sabyasachi Mandal, Wangming Ji, Thomas D. McKnight. The Plant Cell Oct 2019, tpc.00552.2019; DOI: 10.1105/tpc.19.00552

Profile Photo of Mary Wicksten

Hancock ZB, Hardin FO, Light JE. Phylogeography of sand‐burrowing amphipods (Haustoriidae) supports an ancient suture zone in the Gulf of Mexico. J Biogeogr. 2019;00:1–16. https ://doi.org/10.1111/jbi.13686

Profile Photo of Jerome Menet

Greenwell B, Trott AJ, Beytebiere JR, Pao S, Bosley A, Beach E, Finegan P, Hernandez C, Menet JS#. (2019) Rhythmic Food Intake Drives Rhythmic Gene Expression More Potently than the Hepatic Circadian Clock in Mice. Cell Reports 27:649-657.

Profile Photo of Charles Criscione

Caballero, I. C. and C. D. Criscione. 2019. Little to no inbreeding depression in a tapeworm with mixed mating. Journal of Evolutionary Biology 32:1002-1010

Profile Photo of Heath Blackmon

Perkins, R. D., Gamboa, J. R., Jonika, M. M., Lo, J., Shum, A., Adams, R. H. & Blackmon, H. 2019. A database of amphibian karyotypes. Chromosome Research. early online

Profile Photo of Heath Blackmon

Hjelmen, C. E., Blackmon, H., Holmes, V. R., Burrus, C. G. & Johnston, J. S. 2019. Genome Size Evolution Differs Between Drosophila Subgenera with Striking Differences in Male and Female Genome Size in Sophophora. G3: Genes|Genomes|Genetics: g3.400560.2019. early online

Profile Photo of Heath Blackmon

Lo, J., Jonika, M. M. & Blackmon, H. 2019. micRocounter: Microsatellite Characterization in Genome Assemblies. G3: Genes|Genomes|Genetics: g3.400335.2019. early online

profile photo of debby siegeleSiegele DA, LaBonte SA, Wu PI, Chibucos MC, Nandendla S, Giglio MG, Hu JC. (2019) Phenotype annotation with the ontology of microbial phenotypes (OMP). J Biomed Semantics 10:13. https://doi.org/10.1186/s13326-019-0205-5

joe bernardoLiang Yan, Bernardo Joseph, Goldman Daniel, Nõlvak Jaak, Tang Peng, Wang Wenhui and Hints Olle. Morphological variation suggests that chitinozoans may be fossils of individual microorganisms rather than metazoan eggs. 286 Proc. R. Soc. B
http://doi.org/10.1098/rspb.2019.1270

joe bernardoFiggener, C. , Bernardo, J. and Plotkin, P. T. (2019), Beyond trophic morphology: stable isotopes reveal ubiquitous versatility in marine turtle trophic ecology. Biol Rev. doi:10.1111/brv.12543

Profile Photo of Christine MerlinGenome-wide discovery of the daily transcriptome, DNA regulatory elements and transcription factor occupancy in the monarch butterfly brain. Lugena AB, Zhang Y, Menet JS, Merlin C (2019) Genome-wide discovery of the daily transcriptome, DNA regulatory elements and transcription factor occupancy in the monarch butterfly brain. PLOS Genetics 15(7): e1008265. https://doi.org/10.1371/journal.pgen.1008265

Profile Photo of Alan PepperA Millie Burrell, Jeffrey H R Goddard, Paul J Greer, Ryan J Williams, Alan E Pepper, 2019. Sporadic Genetic Connectivity among Small Insular Populations of the Rare Geoendemic Plant Caulanthus amplexicaulis var. barbarae (Santa Barbara Jewelflower), Journal of Heredity, esz029, https://doi.org/10.1093/jhered/esz029

Profile Photo of Alan PepperJanga, M. R., Pandeya, D. , Campbell, L. M., Konganti, K. , Villafuerte, S. T., Puckhaber, L. , Pepper, A. , Stipanovic, R. D., Scheffler, J. A. and Rathore, K. S. (2019), Genes regulating gland development in the cotton plant. Plant Biotechnol J, 17: 1142-1153. doi:10.1111/pbi.13044

Profile Photo of Charles CriscioneJ Sakla, Andrew & T Detwiler, Jillian & Caballero, Isabel & Kelehear, Crystal & Criscione, Charles. (2019). Recognizing the Causes of Parasite Morphological Variation to Resolve the Status of a Cryptogenic Pentastome. The Journal of Parasitology. 105. 432-441.

profile photo of deb bell-pedersen

Circadian clock regulation of the glycogen synthase (gsn) gene by WCC is critical for rhythmic glycogen metabolism in Neurospora crassa. Mokryun BaekStela VirgilioTeresa M. LambOneida IbarraJuvana Moreira AndradeRodrigo Duarte GonçalvesAndrey DovzhenokSookkyung LimDeborah Bell-PedersenMaria Celia BertoliniChristian I.Hong 

Profile Photo of Mary Wicksten

Baba, K. and M. Wicksten. 2019. Chirostyloidean squat lobsters (Crustacea: Decapoda: Anomura) from the Galapagos Islands. Zootaxa 4564: 391-421.

MarTurtSI, a global database of stable isotope analyses of marine turtles. Christine Figgener, Joseph Bernardo & Pamela T. Plotkin. Scientific Datavolume 6, Article number: 16 (2019) https://doi.org/10.1038/s41597-019-0030-9

Profile Photo of Heath BlackmonSchield, D.R., D.C. Card, N.R. Hales, B.W. Perry, G.I.M. Pasquesi, H. Blackmon, R.H. Adams, A.B. Corbin, C.F. Smith, B. Ramesh, J.P. Demuth, E. Betrán, M. Tollis, J.M. Meik, S.P. Mackessy, and T.A. Castoe. The origins and evolution of chromosomes, dosage compensation, and mechanisms underlying venom regulation in snakes. Genome Research, 21 March 2019 in press. doi:10.1101/gr.240952.118

Profile Photo of Jerome MenetTissue-specific BMAL1 cistromes reveal that rhythmic transcription is associated with rhythmic enhancer–enhancer interactions. Joshua R. Beytebiere, Alexandra J. Trott, Ben J. Greenwell, Collin A. Osborne, Helene Vitet, Jessica Spence, Seung-Hee Yoo, Zheng Chen, Joseph S. Takahashi, Noushin Ghaffari, and Jerome S. Menet. Genes Dev. March 1, 2019 33: 294-309; Published in Advance February 25, 2019, doi:10.1101/gad.322198.118

Profile Photo of Christine MerlinThe genetics and epigenetics of animal migration and orientation: birds, butterflies and beyond. Christine Merlin, Miriam Liedvogel. Journal of Experimental Biology 2019 222: jeb191890 doi: 10.1242/jeb.191890. Published 6 February 2019.

Profile Photo of Heath Blackmon

Armstrong, A., N. Anderson, H. Blackmon. Inferring the potentially complex genetic architectures of adaptation, sexual dimorphism, and genotype by environment interactions by partitioning of mean phenotypes. Journal of Evolutionary Biology, 30 January 2019 in press. https://doi.org/10.1111/jeb.13421

Profile Photo of Heath Blackmon

Blackmon, H., J. Justison, I. Mayrose, Goldberg, E.E., Meiotic drive shapes rates of karyotype evolution in mammals. Evolution, 2019 73:3 511-523. https://doi.org/10.1111/evo.13682

Profile Photo of Heath Blackmon

Passow, C., A.M. Bronikowski, H. Blackmon, S. Parsai, T.S. Schwartz, S.E. McGaugh, Contrasting patterns of rapid molecular evolution within the p53 network across mammal and sauropsid lineages. Genome Biology and Evolution, 2019 11:3 629-643. https://doi.org/10.1093/gbe/evy273